.. _crossref_sequence_519: ======== D>gt or ======== D>gt or appears in 152 plasmids under 35 names. - **+1 Site** - :doc:`pKG4880: pPB-EF1α-TagBFP-syn.pA-PGK-mNeonGreen-syn.pA ` - :doc:`pKG4879: pPB-PGK-mNeonGreen-syn.pA-EF1α-TagBFP-syn.pA ` - **-1** - :doc:`pKG3363: pX330 dCas9 lacZ-sgRNA ` - :doc:`pKG3362: pX330 dCas9 MJspacer-sgRNA ` - :doc:`pKG3361: pX330 Cas9 lacZ-sgRNA ` - :doc:`pKG3360: pX330 Cas9 MJspacer-sgRNA ` - :doc:`pKG1562: pX330-Rogi1-PITCh ` - :doc:`pKG1552: p330X-BbsI-PITCh ` - :doc:`pKG1552: p330X-BbsI-PITCh ` - **A** - :doc:`pKG1875: RADAR-CC035 lenti3-CMVTO-BFP-ar70587 ` - **A->G** - :doc:`pKG1653: yp-XI-3-MarkerFree-synMR-mScarlet-AIO ` - **A>C silent mutation** - :doc:`pKG4356: Bxb1-GT-Dox.Div.NFIB-2A-SOX9 ` - :doc:`pKG4355: Bxb1-GT-Dox.Div.NKX2.2-2A-NKX2.6 ` - :doc:`pKG4242: JANUS.Bxb1-GT-DOX.Divergent-pPV2 ` - :doc:`pKG4235: JANUS.Bxb1.GA.DOX.Divergent.pPV2 ` - :doc:`pKG4183: AB.Bxb1-GA_AIO-TetOn_Divergent.Donor ` - **a>g domesticate PaqCI** - :doc:`pKG4255: Bxb1-GA-DOX.Div.MEF2C-P2A-GATA4-T2A-TBX5 ` - :doc:`pKG4254: Bxb1-GA-DOX.Div.NFIA-P2A-SOX9 ` - :doc:`pKG4253: Bxb1-GA-DOX.Div.NKX3.1 ` - **attB** - :doc:`pKG3569: v4sLP-GA.C.320bp_spacer ` - :doc:`pKG3569: v4sLP-GA.C.320bp_spacer ` - :doc:`pKG3568: v4sLP-GA.UT.320bp_spacer ` - :doc:`pKG3568: v4sLP-GA.UT.320bp_spacer ` - :doc:`pKG3455: v4sLP-GA.Divergent.320bp ` - :doc:`pKG3455: v4sLP-GA.Divergent.320bp ` - :doc:`pKG2924: pDONOR-v4-FRT-Bxb1-GA-EF1a-eGFP-bGH-F3 ` - :doc:`pKG2924: pDONOR-v4-FRT-Bxb1-GA-EF1a-eGFP-bGH-F3 ` - **attR2** - :doc:`pKG4620: pShip.USI-[NFAT(IFN)-Super2-P2A-iRFP670] ` - **c>g** - :doc:`pKG4140: pIVT-Flp-2A-Zeo-polyA ` - :doc:`pKG4140: pIVT-Flp-2A-Zeo-polyA ` - **c>g for BsaI GG simulation** - :doc:`pKG4254: Bxb1-GA-DOX.Div.NFIA-P2A-SOX9 ` - **C>G for GGA** - :doc:`pKG4653: pKG4653_AAVS1-GG-CAG-GFP-LP_TC ` - :doc:`pKG4624: pPB.bistable-VP16-protein-repression-Divergent ` - :doc:`pKG4623: pPB.bistable-VP16-protein-control-Divergent ` - :doc:`pKG4599: pPB.bistable-VP16-protein-control-separate-mRuby2 ` - :doc:`pKG4598: pPB.bistable-VP16-protein-control-separate-mGL ` - :doc:`pKG4597: pPB.bistable-VP16-combined-repression-separate-mRuby2 ` - :doc:`pKG4596: pPB.bistable-VP16-combined-repression-separate-mGL ` - :doc:`pKG4595: pPB.bistable-VP16-protein-repression-separate-mRuby2 ` - :doc:`pKG4594: pPB.bistable-VP16-protein-repression-separate-mGL ` - :doc:`pKG4593: pPB.bistable-VP16-protein-control-Tandem ` - :doc:`pKG4592: pPB.bistable-VP16-protein-control-Convergent ` - :doc:`pKG4591: pPB.bistable-VP16-combined-repression-Antisense-Tandem ` - :doc:`pKG4590: pPB.bistable-VP16-combined-repression-Tandem ` - :doc:`pKG4589: pPB.bistable-VP16-combined-repression-Divergent ` - :doc:`pKG4588: pPB.bistable-VP16-combined-repression-Convergent ` - :doc:`pKG4587: pPB.bistable-VP16-protein-repression-Tandem ` - :doc:`pKG4586: pPB.bistable-VP16-protein-repression-Convergent ` - :doc:`pKG4562: (DO NOT USE)PB.HaborPaqCI-CAG.d-PuroR-T2A-mTagBFP2-NLS-WPRE ` - :doc:`pKG4550: (DO NOT USE)PB.HaborPaqCI-CAG.d-rtTA-P2A-PuroR-T2A-mTagBFP2-NLS-WPRE ` - :doc:`pKG4351: Bxb1-GA-GG-LP ` - :doc:`pKG4350: pHDR-SH7-Bxb1-GG-LP ` - :doc:`pKG4312: pSHIP-F13-CBh-eGFP-Bxb1-GG.LP-F14 ` - :doc:`pKG4311: USI-CAG.d-MTS.iRFP670-T2A-tagBFP.NLS.WPRE ` - :doc:`pKG4104: S.I.Bxb1-GT-CAG.d-rtTA-2A-mTagBFP2.NLS-bGH ` - **C>G for PaqCI GG** - :doc:`pKG4350: pHDR-SH7-Bxb1-GG-LP ` - **Destroy Mlu1** - :doc:`pKG2584: pSHIP_EF1a-attB-(mRuby2P2APuroR-RBG)rev-attP-(UBC)rev ` - :doc:`pKG1049: EF1a-mRuby-SV40 inside phiC31 sites ` - :doc:`pKG1048: mRuby-SV40 inside phiC31 sites ` - :doc:`pKG1017: mRuby-noPA inside phiC31 sites ` - :doc:`pKG1015: pFL108_lenti_with EF1a-EGFP-BGH inside bxb1 sites ` - :doc:`pKG1014: pFL119_PB.P-phiC31attBP-EGFPcon-mRubyNR ` - :doc:`pKG997: EF1a-(EF1a-EGFP)rev-bxb1attBP ` - :doc:`pKG905: PB-EF1a-attPphiC31-EGFPpAfwd-attBphiC31 ` - :doc:`pKG902: PB-EF1a-attPbxb1-EGFPpAfwd-attBbxb1 ` - :doc:`pKG888: phage-EF1a-attBphiC31-EGFPpArev-attPphiC31 ` - :doc:`pKG885: phage-EF1a-attBbxb1-EGFPpArev-attPbxb1 ` - :doc:`pKG777: pFLIP49_pMXS_attBphiC31-EGFPpArev-attPphiC31 ` - :doc:`pKG708: pFLIP20_pENTR-attBphiC31-EGFPpArev-attPphiC31 ` - :doc:`pKG696: lenti-EF1a-attBphiC31-RGpArev-EGFPrev-attPphiC31-UBCrev ` - :doc:`pKG695: lenti-EF1a-attBbxb1-RGpArev-EGFPrev-attPbxb1-UBCrev ` - :doc:`pKG656: lenti-EF1a-attBphiC31-EGFPpArev-attPphiC31 ` - :doc:`pKG646: lenti-EF1a-attBbxb1-RGpArev-EGFPrev-attPbxb1 ` - :doc:`pKG645: lenti-EF1a-attR-attBphiC31-EGFPrev-attPphiC31-RGpA-attR ` - :doc:`pKG644: lenti-EF1a-attR-attBbxb1-EGFPrev-attPbxb1-RGpA-attR ` - :doc:`pKG632: pFLIP8-lenti-EF1a-bxb1attB-EGFPrev-bxb1attP-lenti ` - :doc:`pKG607: pFLIP10_lenti-EF1a-attBphiC31-EGFPrev-attPphiC31-lenti ` - :doc:`pKG576: ΦC31 ( PhiC31 ) attB/P reporter ` - :doc:`pKG575: Bxb1 attB/P reporter ` - **EcoRI** - :doc:`pKG567: pENTR-prrx1 ` - **edited to remove EcoRI** - :doc:`pKG1536: AP1_crGFP_guide ` - **EF-1-alpha core promoter** - :doc:`pKG1727: Convergent_dCas12a_gRNA_lentiX ` - :doc:`pKG1725: Tandem_dCas12a_gRNA_lentiX ` - :doc:`pKG1722: Convergent_dCas12a_gRNA_pha017 ` - :doc:`pKG1720: Tandem_dCas12a_gRNA_pha017 ` - :doc:`pKG1612: MJ_DSI_TRIPLEX ` - :doc:`pKG1611: MJ_DSF_TRIPLEX ` - :doc:`pKG1510: pPV1-AP1 ` - **EF-1α promoter** - :doc:`pKG4494: pLentiX.USI-TRE3G-loxCN-mCherry-hRAS-bGH.DSF-EFS-rtTA-TagBFP-WPRE ` - :doc:`pKG3764: LentiX-YB1lenti--WPRE ` - :doc:`pKG3733: pPV1-loxPcon-TET-DIAL ` - :doc:`pKG3444: pMEE026-pSHIP-Tet380-CEBPa-2A-mGL-bGH ` - :doc:`pKG3346: pMEE037-pENTR-Tet380-Pu.1-2A-tagBFP-WPRE ` - :doc:`pKG3343: pMEE027-pSHIP-Tet380-Pu.1-2A-tagBFP-bGH ` - **H863A** - :doc:`pKG2928: pPV2-NLS-CasRx-P2A-mCherry-NLS ` - **Kozak sequence** - :doc:`pKG3911: pSHSK64_DSF_(DIAL-loxP;VloxP-nest)rev ` - :doc:`pKG2024: pPVSK46_pPV1_(ZF43_6x_C)rev ` - :doc:`pKG1830: pTET46_Divergent_6xZF43-mGL-bGH-1x.spacer-EF1a-ZF43-TagBFP-bGH ` - :doc:`pKG1038: pLentiX1-inv-ZF43x6-C-dsRedR95K-ZF37-H57Y-bGH ` - **KpnI 3' site** - :doc:`pKG20: Hb9::linker lenti + WPRE ` - :doc:`pKG18: Hb9::linker lenti (minus WPRE) ` - **New Feature(20)** - :doc:`pKG922: pFLIP31_pENTR-VCre-GIBC ` - :doc:`pKG603: PV1-GAI-L1-VCre-173C-NLS-BGHpA (GIB inducible VCre C) ` - **NLS-iCre** - :doc:`pKG3854: pTA518 ` - :doc:`pKG3852: pTA516 ` - :doc:`pKG3851: pTA515 ` - :doc:`pKG3312: PB.D.mAb17-mRuby2 ` - :doc:`pKG3311: PB.UT.mAb17-mR2 ` - :doc:`pKG3310: DSF.CMV.mAb17-LC-mRuby2 ` - :doc:`pKG3299: PB.DT.mAb17-mR2 ` - :doc:`pKG3274: DSI.CMV.mAb17-LC-mRuby2 ` - :doc:`pKG3273: USI.CMV.mAb17-LC-mRuby2 ` - :doc:`pKG3272: USF.CMV.mAb17-LC-mRuby2 ` - :doc:`pKG3259: pPV2-mAb17-LC-2A-mRuby2 ` - **Oct4** - :doc:`pKG4403: pLentiX1_CMV_p21_P2A_mRuby_WPRE ` - :doc:`pKG4402: pLentiX1_hPGK_p21_P2A_mRuby_WPRE ` - :doc:`pKG4401: pMXs_p21_P2A_mRuby ` - :doc:`pKG4400: pENTR_CMV_p21_P2A_mRuby2_WPRE ` - :doc:`pKG4399: pENTR_hPGK_p21_P2A_mRuby2_WPRE ` - :doc:`pKG4398: pENTR_p21_P2A_mRuby2 ` - :doc:`pKG4397: pPv2_p21_P2A_mRuby2 ` - **possible T (clone 1)** - :doc:`pKG561: pMXs-MCP-mCherry-NLS-miR.124T.2x ` - :doc:`pKG555: pENTR-MCP-mCherry-NLS-miR.124T.2x ` - **PuroR** - :doc:`pKG4019: pMXs-[desNb(EGFP)-BleoR-mRuby2]-WPRE ` - :doc:`pKG4015: pENTR-CMV-[desNb(EGFP)-BleoR-mRuby2]-bGH ` - **removed BamHI site** - :doc:`pKG1494: pENTR-EFS-hCDM8-T2A-mGL ` - :doc:`pKG1494: pENTR-EFS-hCDM8-T2A-mGL ` - :doc:`pKG1393: pPV2-hCDM8-T2A-mGL ` - :doc:`pKG1393: pPV2-hCDM8-T2A-mGL ` - **Rogi2-HA-up** - :doc:`pKG3758: pHDR-TK-AAVS1-v3GA-LP-ITPN ` - :doc:`pKG3463: pHDR-AAVS1-TK-v3LP-loxP-SNAP-Bxb1-GT-lox257 ` - :doc:`pKG3366: pHDR AAVS1-v3LP-GT-tagBFP ` - :doc:`pKG3287: pHA-AAVS1-ITPN-TK-counter ` - **Sal1** - :doc:`pKG645: lenti-EF1a-attR-attBphiC31-EGFPrev-attPphiC31-RGpA-attR ` - :doc:`pKG644: lenti-EF1a-attR-attBbxb1-EGFPrev-attPbxb1-RGpA-attR ` - **silent mutation to remove xhoi** - :doc:`pKG1536: AP1_crGFP_guide ` - **Starting G nucleotide** - :doc:`pKG2426: PB.C.UT.Cas12a.U6 ` - :doc:`pKG2390: U6_crGFP_DSI ` - **T in sequencing** - :doc:`pKG962: PB-TRE-Oct4-SV40pA-PGK-Luc-SV40pA-EF1a-CymR-NLS-T2A-puroR-SV40pA ` - :doc:`pKG959: PB-EFS-NLS-MCPx2-mCherry-SV40pA-EF1a-rtTA-T2A-hygroR-SV40pA ` - **T in sequencing, still Leu** - :doc:`pKG954: pMXs-Halo(miR.FF3) ` - **T->C** - :doc:`pKG4106: CLASSIC-Dest-AC_pROC1067 ` - **tight TRE promoter** - :doc:`pKG980: pTB003_pCW57.Divergent ` - :doc:`pKG979: pTB002_pCW57.Convergent ` - :doc:`pKG978: pTB001_pCW57.Tandem ` - :doc:`pKG830: pCW57-Dest-noPromoter ` - **β-globin 5' UTR** - :doc:`pKG4673: pMXs-monoCIDD(L341P)-W ` - :doc:`pKG4671: pPV2-monoCIDD(L341P) ` - :doc:`pKG3523: pMXs-CIDD-WPRE ` - :doc:`pKG2178: pPV2-c-Myc-IRES-p53DD ` - :doc:`pKG2177: pIVT-c-Myc-IRES-p53DD-beta-globin ` - :doc:`pKG2165: pENTR-c-Myc-IRES-p53DD `